BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB012F11SP1|AL426404
(803 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig577 417 e-116
3x_Contig1805 245 8e-65
>3x_Contig577
Length = 1642
Score = 417 bits (197), Expect = e-116
Identities = 271/301 (90%)
Strand = Plus / Plus
Query: 503 ttcttccaacaccaammcycactcctaatagagcccaccmtaccacccagaccgacgtcg 562
|||||| |||||||| | | || |||||||||| || ||| || |||| || || |
Sbjct: 108 ttcttcaaacaccaaaactaaatcataatagagccaacaatacaacaaagacagaagtag 167
Query: 563 cyagtgcccytgtcgcaccaccytcccmtgtggtgcctggsccctccgtcgacgctcttg 622
| ||| ||| ||| |||||||| || |||||||||||| || || || || ||||||
Sbjct: 168 ctagtacccttgtagcaccaccttcaaatgtggtgcctggaccatcagtagaaactcttg 227
Query: 623 atgaggtcgagtccgatgttaaacctgacggagttgaagtttgtcctccattattattgt 682
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 228 atgaggtcgagtccgatgttaaacctgacggagttgaagtttgtcctccattattattgt 287
Query: 683 catcttgatcagtcgtagtgtctgtagaggtggttggtggctcaagggtggttctgcctt 742
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 catcttgatcagtcgtagtgtctgtagaggtggttggtggctcaagggtggttctgcctt 347
Query: 743 cgtcatcagtagtgttatcatcaccattatcatctgaagtcttatcatcatcgccatctg 802
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 cgtcatcagtagtgttatcatcaccattatcatctgaagtcttatcatcatcgccatctg 407
Query: 803 t 803
|
Sbjct: 408 t 408
>3x_Contig1805
Length = 19369
Score = 245 bits (116), Expect = 8e-65
Identities = 143/152 (94%)
Strand = Plus / Minus
Query: 652 ggagttgaagtttgtcctccattattattgtcatcttgatcagtcgtagtgtctgtagag 711
||||||||||||| ||||||||| |||||||||||||||||| |||||||||||||||
Sbjct: 1774 ggagttgaagtttctcctccatttccattgtcatcttgatcagttgtagtgtctgtagag 1715
Query: 712 gtggttggtggctcaagggtggttctgccttcgtcatcagtagtgttatcatcaccatta 771
||||| |||||||||| |||||||||||| || |||||||||||||||||||||||||||
Sbjct: 1714 gtggtcggtggctcaatggtggttctgccatcatcatcagtagtgttatcatcaccatta 1655
Query: 772 tcatctgaagtcttatcatcatcgccatctgt 803
||||||||||||||||||||||||||||||||
Sbjct: 1654 tcatctgaagtcttatcatcatcgccatctgt 1623
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.47 0.724 1.38
Gapped
Lambda K H
1.47 0.724 1.38
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2059
Number of Sequences: 1807
Number of extensions: 2059
Number of successful extensions: 57
Number of sequences better than 1.0e-20: 2
length of query: 803
length of database: 10,358,551
effective HSP length: 15
effective length of query: 788
effective length of database: 10,331,446
effective search space: 8141179448
effective search space used: 8141179448
T: 0
A: 40
X1: 5 (10.6 bits)
X2: 14 (29.6 bits)
S1: 11 (23.7 bits)
S2: 47 (99.9 bits)